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Table 4. Number of genes associated with the general COG functional categories

From: Complete genome sequence of Allochromatium vinosum DSM 180T

Code Value %age Description
J 160 5.70 Translation, ribosomal structure and biogenesis
A 1 0.04 RNA processing and modification
K 106 3.78 Transcription
L 145 5.17 Replication, recombination and repair
B 1 0.04 Chromatin structure and dynamics
D 51 1.82 Cell cycle control, cell division, chromosome partitioning
Y 0 0.00 Nuclear structure
V 49 1.75 Defense mechanisms
T 303 10.80 Signal transduction mechanisms
M 198 7.06 Cell wall/membrane biogenesis
N 1,135 4.81 Cell motility
Z 0 0.0 Cytoskeleton
W 0 0.0 Extracellular structures
U 84 2.99 Intracellular trafficking and secretion
O 126 4.49 Posttranslational modification, protein turnover, chaperones
C 224 7.98 Energy production and conversion
G 101 3.60 Carbohydrate transport and metabolism
E 148 5.27 Amino acid transport and metabolism
F 54 1.92 Nucleotide transport and metabolism
H 159 5.67 Coenzyme transport and metabolism
I 63 2.25 Lipid transport and metabolism
P 172 6.13 Inorganic ion transport and metabolism
Q 41 1.46 Secondary metabolites biosynthesis, transport and catabolism
R 261 9.30 General function prediction only
S 224 7.98 Function unknown
- 861 25.58 Not in COGs