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Table 3. Genome Statistics

From: Complete genome sequence of Allochromatium vinosum DSM 180T

Attribute

Value

% of Total

Genome size (bp)

3,669,074

100.00%

DNA coding region (bp)

3,324,920

90,62%

DNA G+C content (bp)

2,355,037

64.19%

Number of replicons

3

 

Extrachromosomal elements

2

 

Total genes

3,366

100.00%

RNA genes

64

1.90%

rRNA operons

3

 

Protein-coding genes

3,302

98.10%

Pseudo genes

82

2.44%

Genes with function prediction

2,466

73.26%

Genes in paralog clusters

413

12.27%

Genes assigned to COGs

2,505

74.42%

Genes assigned Pfam domains

2,662

79.08%

Genes with signal peptides

649

19.28%

Genes with transmembrane helices

771

22.91%

CRISPR repeats

3

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