Skip to main content

Advertisement

Table 3. Genome Statistics

From: Complete genome sequence of Allochromatium vinosum DSM 180T

Attribute Value % of Total
Genome size (bp) 3,669,074 100.00%
DNA coding region (bp) 3,324,920 90,62%
DNA G+C content (bp) 2,355,037 64.19%
Number of replicons 3  
Extrachromosomal elements 2  
Total genes 3,366 100.00%
RNA genes 64 1.90%
rRNA operons 3  
Protein-coding genes 3,302 98.10%
Pseudo genes 82 2.44%
Genes with function prediction 2,466 73.26%
Genes in paralog clusters 413 12.27%
Genes assigned to COGs 2,505 74.42%
Genes assigned Pfam domains 2,662 79.08%
Genes with signal peptides 649 19.28%
Genes with transmembrane helices 771 22.91%
CRISPR repeats 3