Table 2. Genome sequencing project information
From: Complete genome sequence of Allochromatium vinosum DSM 180T
MIGS ID | Property | Term |
|---|---|---|
MIGS-31 | Finishing quality | Finished |
MIGS-28 | Libraries used | A Titanium draft library (319.2 +/− 157.8 bp insert size), two paired end (15712 +/− 3928 bp, 15,574 +/− 3,893 bp insert sizes) and one Illumina library (36 bp insert size) |
MIGS-29 | Sequencing platforms | 454 Titanium, Illumina |
MIGS-31.2 | Sequencing coverage | 136× 454 Titanium, 30× Illumina GAii |
MIGS-30 | Assemblers | Newbler, phrap |
MIGS-32 | Gene calling method | Prodigal, GenePRIMP |
| Â | INSDC ID | CP001896 (chromosome) |
| Â | CP001897 (plasmid pALVIN01) | |
| Â | CP001898 (plasmid pALVIN02) | |
| Â | GenBank Date of Release | August 1, 2010 |
| Â | GOLD ID | Gc01210 |
| Â | NCBI project ID | 32547 |
| Â | IMG Taxon ID | 646564502 |
MIGS-13 | Source material identifier | DSM 180 |
| Â | Project relevance | Biotechnological, Environmental, Hydrogen production |