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Table 3. Genome statistics

From: Complete genome sequence of Thioalkalivibrio sp. K90mix

Attribute

Value

% of Total

Genome size (bp)

2,985,056

100.00%

DNA coding region (bp)

2,673,521

89.56%

DNA G+C content (bp)

1,956,383

65.54%

Number of replicons

1

 

Extrachromosomal elements (plasmid)

1

 

Total genes

2,942

100.00%

RNA genes

54

1.84%

rRNA operons

3

0.10%

Protein-coding genes

2,888

98.16%

Pseudogenes

33

1.12%

Genes in paralog clusters

267

9.08%

Genes assigned to COGs

2,139

72.71%

Genes assigned Pfam domains

2,292

77.91%

Genes with signal peptides

934

31.75%

CRIPR repeats

2

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