Table 3. Genome Statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 5,783,292 | 100.00% |
DNA coding region (bp) | 5,256,086 | 90.88% |
DNA G+C content (bp) | 3,918,840 | 67.76% |
Number of replicons | 1 | |
Extrachromosomal elements | 2 | |
Total genes | 5,434 | 100.00% |
RNA genes | 55 | 1.01% |
rRNA operons | 2 | |
Protein-coding genes | 5,379 | 98.99% |
Pseudo genes | 30 | 0.55% |
Genes with function prediction | 3,657 | 67.30% |
Genes in paralog clusters | 403 | 7.42% |
Genes assigned to COGs | 4,038 | 74.31% |
Genes assigned Pfam domains | 4,188 | 77.07% |
Genes with signal peptides | 1,617 | 29.76% |
Genes with transmembrane helices | 1,185 | 33.80% |
CRISPR repeats | 0 |