Skip to main content

Table 4. Number of genes associated with the general COG functional categories

From: Genome sequence of Haemophilus parasuis strain 29755

Code Value %agea Description
J 168 6.55 Translation
A 1 0.03 RNA processing and modification
K 127 4.96 Transcription
L 166 6.48 Replication, recombination and repair
B 0 0.00 Chromatin structure and dynamics
D 33 1.29 Cell cycle control, mitosis and meiosis
Y 0 0.00 Nuclear structure
V 32 1.25 Defense mechanisms
T 48 1.87 Signal transduction mechanisms
M 134 5.23 Cell wall/membrane biogenesis
N 16 0.62 Cell motility
Z 0 0.00 Cytoskeleton
W 24 0.94 Extracellular structures
U 75 2.93 Intracellular trafficking and secretion
O 101 3.94 Posttranslational modification, protein turnover, chaperones
C 115 4.49 Energy production and conversion
G 139 5.42 Carbohydrate transport and metabolism
E 175 6.83 Amino acid transport and metabolism
F 57 2.22 Nucleotide transport and metabolism
H 97 3.78 Coenzyme transport and metabolism
I 43 1.68 Lipid transport and metabolism
P 116 4.53 Inorganic ion transport and metabolism
Q 25 0.96 Secondary metabolites biosynthesis, transport and catabolism
R 234 9.13 General function prediction only
S 197 7.69 Function unknown
- 440 17.16 Not in COGs
  1. a Based on the total number of protein coding genes in the annotated genome