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Table 1. Classification and general features of Parvibaculum lavamentivorans DS-1T.

From: Complete genome sequence of Parvibaculum lavamentivorans type strain (DS-1T)

MIGS ID

Property

Term

Evidence codea

 

Current classification

Domain Bacteria

TAS [21]

 

PhylumProteobacteria

TAS [22]

 

ClassAlphaproteobacteria

TAS [23,24]

 

OrderRhizobiales

TAS [23,25]

 

FamilyRhodobiaceae

TAS [23,26]

 

GenusParvibaculum

TAS [3]

 

SpeciesParvibaculum lavamentivorans

TAS [3]

 

Type strain DS-1

 
 

Gram stain

negative

TAS [3]

 

Cell shape

small rod

TAS [3]

 

Motility

motile

TAS [3]

 

Sporulation

non-sporulating

TAS [3]

 

Temperature range

mesophile

TAS [3]

 

Optimum temperature

30 °C

TAS [3]

 

Carbon source

acetate, ethanol, pyruvate, succinate, alkanes (C8–C16), various anionic and non-ionic surfactants

TAS [2,3,5,7]

 

Energy source

chemoorganotroph

TAS [3]

 

Terminal electron receptor

molecular oxygen

TAS [3]

MIGS-6

Habitat

aerobic habitat

TAS [2,27]

MIGS-6.3

Salinity

0–3% NaCl

TAS [3]

MIGS-22

Oxygen requirement

aerobic

TAS [3]

MIGS-15

Biotic relationship

free-living

TAS [3]

MIGS-14

Pathogenicity

none

TAS [3]

MIGS-4

Geographic location

isolated from a surfactant-degrading laboratory trickling filter that was inoculated with sludge of an industrial sewage treatment plant in Ludwigshafen, Germany

TAS [2]

MIGS-5

Sample collection time

1999

TAS [2]

MIGS-4.1

Latitude

49.48

TAS [2]

MIGS-4.2

Longitude

8.44

TAS [2]

MIGS-4.3

Depth

  

MIGS-4.4

Altitude

96 m

TAS [2]

  1. a) Evidence codes - IDA: Inferred from Direct Assay; TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from of the Gene Ontology project [28].