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Table 3. Genome Statistics

From: Complete genome sequence of Pedobacter heparinus type strain (HIM 762-3T)

Attribute Value % of Total
Genome size (bp) 5,167,383 100.00%
DNA Coding region (bp) 4,829,823 93.47%
DNA G+C content (bp) 2,172,827 42.05%
Number of replicons 1  
Extrachromosomal elements 0  
Total genes 4341 100.00%
RNA genes 54 1.22%
rRNA operons 3  
Protein-coding genes 4287 98.69%
Pseudo genes 35 0.81%
Genes with function prediction 2911 67.05%
Genes in paralog clusters 899 20.70%
Genes assigned to COGs 2806 64.59%
Genes assigned Pfam domains 2991 68.85%
Genes with signal peptides 1425 32.80%
Genes with transmembrane helices 1051 24.19%
CRISPR repeats 0 0.00%