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Table 4. Number of genes associated with the general COG functional categories

From: Complete genome sequence of the gliding, heparinolytic Pedobacter saltans type strain (113T)

Code value %age Description
J 158 5.5 Translation, ribosomal structure and biogenesis
A 0 0.0 RNA processing and modification
K 175 6.1 Transcription
L 142 5.0 Replication, recombination and repair
B 1 0.0 Chromatin structure and dynamics
D 26 0.9 Cell cycle control, cell division, chromosome partitioning
Y 0 0.0 Nuclear structure
V 55 1.9 Defense mechanisms
T 146 5.1 Signal transduction mechanisms
M 278 9.7 Cell wall/membrane/envelope biogenesis
N 11 0.4 Cell motility
Z 0 0.0 Cytoskeleton
W 0 0.0 Extracellular structures
U 47 1.6 Intracellular trafficking, secretion, and vesicular transport
O 106 3.7 Posttranslational modification, protein turnover, chaperones
C 157 5.5 Energy production and conversion
G 282 9.8 Carbohydrate transport and metabolism
E 172 6.0 Amino acid transport and metabolism
F 69 2.4 Nucleotide transport and metabolism
H 128 4.5 Coenzyme transport and metabolism
I 86 3.0 Lipid transport and metabolism
P 195 6.8 Inorganic ion transport and metabolism
Q 41 1.4 Secondary metabolites biosynthesis, transport and catabolism
R 355 12.4 General function prediction only
S 238 8.3 Function unknown
- 1,277 32.6 Not in COGs