Table 3. Genome Statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 3,384,766 | 100.00% |
DNA coding region (bp) | 2,896,588 | 85.58% |
DNA G+C content (bp) | 2,000,875 | 59.11% |
Number of replicons | 1 | |
Extrachromosomal elements | 0 | |
Total genes | 3,401 | 100.00% |
RNA genes | 78 | 2.29% |
rRNA operons | 5 | |
Protein-coding genes | 3,323 | 97.71% |
Pseudo genes | 173 | 5.09% |
Genes with function prediction | 2,404 | 70.69% |
Genes in paralog clusters | 718 | 21.11% |
Genes assigned to COGs | 2,456 | 74.21% |
Genes assigned Pfam domains | 2,657 | 78.12% |
Genes with signal peptides | 530 | 15.58% |
Genes with transmembrane helices | 728 | 21.41% |
CRISPR repeats | 4 |