Table 4. Number of genes associated with the general COG functional categories
Code | value | %age | Description |
|---|---|---|---|
J | 224 | 2.9 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 893 | 11.6 | Transcription |
L | 975 | 12.6 | Replication, recombination and repair |
B | 3 | 0.0 | Chromatin structure and dynamics |
D | 34 | 0.4 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 215 | 2.8 | Defense mechanisms |
T | 617 | 8.0 | Signal transduction mechanisms |
M | 257 | 3.3 | Cell wall/membrane/envelope biogenesis |
N | 20 | 0.3 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 54 | 0.7 | Intracellular trafficking, secretion, and vesicular transport |
O | 195 | 2.5 | Posttranslational modification, protein turnover, chaperones |
C | 416 | 5.4 | Energy production and conversion |
G | 612 | 7.9 | Carbohydrate transport and metabolism |
E | 474 | 6.2 | Amino acid transport and metabolism |
tF | 135 | 1.8 | Nucleotide transport and metabolism |
H | 264 | 3.4 | Coenzyme transport and metabolism |
I | 236 | 3.1 | Lipid transport and metabolism |
P | 255 | 3.3 | Inorganic ion transport and metabolism |
Q | 217 | 2.8 | Secondary metabolites biosynthesis, transport and catabolism |
R | 1,098 | 14.4 | General function prediction only |
S | 519 | 6.7 | Function unknown |
- | 4,886 | 42.3 | Not in COGs |