Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1AT)

Table 1. Classification and general features of P. fumarii 1A^T according to the MIGS recommendations [22] and the NamesforLife database [23].

MIGS ID	Property	Term	Evidence code
		Domain Archaea	TAS [24]
		Phylum Crenarchaeota	TAS [25]
		Class Thermoprotei	TAS [26,27]
		Order Desulfurococcales	TAS [26,28]
		Family Pyrodictiaceae	TAS [29]
		Genus Pyrolobus	TAS [1,3]
		Species Pyrolobus fumarii	TAS [1,3]
	Current classification	Type strain 1A	TAS [1]
	Gram stain	“negative”	TAS [1]
	Cell shape	regularly to irregularly lobed cocci, occurring singly and in short chains	TAS [1]
	Motility	none	TAS [1]
	Sporulation	none	TAS [1]
	Temperature range	90–113°C	TAS [1]
	Optimum temperature	106°C	TAS [1]
	Salinity	1%–4% (w/v) NaCl (optimum 1.7%)	TAS [1]
MIGS-22	Oxygen requirement	facultatively microaerophilic	TAS [1]
	Carbon source	CO₂	TAS [1]
	Energy metabolism	chemolithoautotrophic	TAS [1]
MIGS-6	Habitat	abyssal deep-sea hydrothermal systems	TAS [1]
MIGS-15	Biotic relationship	free-living	NAS
MIGS-14	Pathogenicity	none	NAS
	Biosafety level	1	TAS [30]
	Isolation	rock samples from wall of a black smoker	TAS [1]
MIGS-4	Geographic location	Mid Atlantic Ridge	TAS [1]
MIGS-5	Sample collection time	1993	NAS
MIGS-4.1	Latitude	26	TAS [1]
MIGS-4.2	Longitude	− 45	TAS [1]
MIGS-4.3	Depth	3,650 m	TAS [1]
MIGS-4.4	Altitude	− 3,650 m	TAS [1]

Evidence codes - IDA: Inferred from Direct Assay (first time in publication); TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from of the Gene Ontology project [31]. If the evidence code is IDA, the property should have been directly observed by one of the authors or an expert mentioned in the acknowledgements

ISSN: 2524-6372