Skip to main content

Table 1. Classification and general features of strain HIMB100 according to the MIGS recommendations [12]

From: Draft genome sequence of strain HIMB100, a cultured representative of the SAR116 clade of marine Alphaproteobacteria

MIGS ID

Property

Term

Evidence code

 

Current classification

Domain Bacteria

TAS [13]

 

Phylum Proteobacteria

TAS [14]

 

Class Alphaproteobacteria

TAS [15,16]

 

Order Rhodospirillales

TAS [17,18]

 

Family Rhodospirillaceae

TAS [17,18]

 

Genus not assigned

 
 

Species not assigned

 
 

Type strain HIMB100

IDA

 

Gram stain

negative

NAS

 

Cell shape

spiral-shaped

IDA

 

Motility

unknown

 
 

Sporulation

non-sporulating

NAS

 

Temperature range

mesophilic

IDA

 

Optimum temperature

unknown

 
 

Carbon source

ambient seawater DOC

TAS [1]

 

Energy source

chemoorganoheterotrophic

NAS

MIGS-6

Habitat

sea water

 

MIGS-6.3

Salinity

35.0 ‰

NAS

MIGS-22

Oxygen

aerobic

NAS

MIGS-15

Biotic relationship

free-living

TAS [1]

MIGS-14

Pathogenicity

none

NAS

MIGS-4

Geographic location

Kaneohe Bay, Hawaii, subtropical Pacific Ocean

TAS [1]

MIGS-5

Sample collection time

18 May 2005

TAS [1]

MIGS-4.1

Latitude

21.44

TAS [1]

MIGS-4.2

Longitude

−157.78

TAS [1]

MIGS-4.3

Depth

~1 m

TAS [1]

  1. Evidence codes - IDA: Inferred from Direct Assay (first time in publication); TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [19]. If the evidence code is IDA, the property was directly observed by one of the authors or an expert mentioned in the acknowledgements.