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Table 4. Number of genes associated with the general COG functional categories

From: Complete genome sequence of the extremely halophilic Halanaerobium praevalens type strain (GSLT)

Code value %age Description
J 133 6.9 Translation, ribosomal structure and biogenesis
A 0 0.0 RNA processing and modification
K 124 6.4 Transcription
L 115 6.0 Replication, recombination and repair
B 1 0.0 Chromatin structure and dynamics
D 24 1.2 Cell cycle control, cell division, chromosome partitioning
Y 0 0.0 Nuclear structure
V 18 0.9 Defense mechanisms
T 126 6.5 Signal transduction mechanisms
M 106 5.5 Cell wall/membrane/envelope biogenesis
N 76 3.9 Cell motility
Z 0 0.0 Cytoskeleton
W 0 0.0 Extracellular structures
U 44 2.3 Intracellular trafficking, secretion, and vesicular transport
O 66 3.4 Posttranslational modification, protein turnover, chaperones
C 123 6.4 Energy production and conversion
G 150 7.8 Carbohydrate transport and metabolism
E 136 7.0 Amino acid transport and metabolism
F 74 3.8 Nucleotide transport and metabolism
H 80 4.1 Coenzyme transport and metabolism
I 45 2.3 Lipid transport and metabolism
P 121 6.3 Inorganic ion transport and metabolism
Q 18 0.9 Secondary metabolites biosynthesis, transport and catabolism
R 186 9.6 General function prediction only
S 168 8.7 Function unknown
- 420 19.3 Not in COGs