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Table 1. Classification and general features of R. rubrum according to the MIGS recommendations [11].

From: Complete genome sequence of Rhodospirillum rubrum type strain (S1T)

MIGS ID

Property

Term

Evidence code

 

Current classification

Domain Bacteria

TAS [12]

 

Phylum ‘Proteobacteria

TAS [13]

 

Class Alphaproteobacteria

TAS [14,15]

 

Order Rhodospirillales

TAS [16,17]

 

Family Rhodospirillaceae

TAS [16,17]

 

Genus Rhodospirillum

TAS [1721]

 

Species Rhodospirillum rubrum

TAS [17,18,22]

 

Type strain S1

TAS [1,2]

 

Gram stain

negative

NAS

 

Cell shape

spiral-shaped

TAS [1]

 

Motility

motile

TAS [1]

 

Sporulation

not reported

 
 

Temperature range

mesophile

NAS

 

Optimum temperature

25–30°C

NAS

 

Salinity

not reported

 

MIGS-22

Oxygen requirement

facultative anaerobe

TAS [2]

 

Carbon source

numerous 1- and multi-C compounds

TAS [2]

 

Energy metabolism

photolithotroph, photoautotroph, aerobic heterotroph, fermentation carbon monoxide

TAS [2,23]

MIGS-6

Habitat

fresh water

NAS

MIGS-15

Biotic relationship

free living

NAS

MIGS-14

Pathogenicity

none

NAS

 

Biosafety level

1

TAS [24]

 

Isolation

not reported

 

MIGS-4

Geographic location

not reported

 

MIGS-5

Sample collection time

1941

TAS [2]

MIGS-4.1

Latitude

not reported

 

MIGS-4.2

Longitude

 

MIGS-4.3

Depth

not reported

 

MIGS-4.4

Altitude

not reported

 
  1. Evidence codes - IDA: Inferred from Direct Assay (first time in publication); TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from of the Gene Ontology project [25]. If the evidence code is IDA, the property was directly observed by one of the authors or an expert mentioned in the acknowledgements.