Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Cellulophaga algicola type strain (IC166T)
Code | value | %age | Description |
|---|---|---|---|
J | 160 | 5.8 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 174 | 6.3 | Transcription |
L | 147 | 5.4 | Replication, recombination and repair |
B | 1 | 0.0 | Chromatin structure and dynamics |
D | 20 | 0.7 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 63 | 2.3 | Defense mechanisms |
T | 167 | 6.1 | Signal transduction mechanisms |
M | 239 | 8.7 | Cell wall/membrane/envelope biogenesis |
N | 7 | 0.3 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 41 | 1.5 | Intracellular trafficking, secretion, and vesicular transport |
O | 99 | 3.6 | Posttranslational modification, protein turnover, chaperones |
C | 135 | 4.9 | Energy production and conversion |
G | 172 | 6.3 | Carbohydrate transport and metabolism |
E | 208 | 7.6 | Amino acid transport and metabolism |
F | 70 | 2.6 | Nucleotide transport and metabolism |
H | 131 | 4.8 | Coenzyme transport and metabolism |
I | 97 | 3.5 | Lipid transport and metabolism |
P | 174 | 6.3 | Inorganic ion transport and metabolism |
Q | 52 | 1.9 | Secondary metabolites biosynthesis, transport and catabolism |
R | 345 | 12.6 | General function prediction only |
S | 247 | 9.0 | Function unknown |
- | 1,808 | 41.6 | Not in COGs |