Table 3. Genome statistics
From: Complete genome sequence of “Thioalkalivibrio sulfidophilus” HL-EbGr7
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 3,464,554 | 100.00% |
DNA coding region (bp) | 3,030,998 | 87.49% |
DNA G+C content (bp) | 2,254,142 | 65.06% |
Number of replicons | 1 | |
Extrachromosomal elements | 0 | |
Total genes | 3366 | 100.00% |
RNA genes | 47 | 1.40% |
rRNA operons | 3 | 0.09% |
Protein-coding genes | 3319 | 98.06% |
Pseudogenes | 36 | 1.07% |
Genes in paralog clusters | 294 | 8.73% |
Genes assigned to COGs | 2512 | 74.36% |
Genes assigned Pfam domains | 2653 | 78.82% |
Genes with signal peptides | 719 | 21.36% |
CRISPR repeats | 2 |