Table 4. Number of genes associated with the 21 general COG functional categories
From: Complete genome sequence of Acidimicrobium ferrooxidans type strain (ICPT)
Code | Value | % | Description |
|---|---|---|---|
J | 134 | 6.6 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.0 | RNA processing and modification |
K | 94 | 4.6 | Transcription |
L | 119 | 5.8 | Replication, recombination and repair |
B | 1 | 0.0 | Chromatin structure and dynamics |
D | 24 | 1.2 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.0 | Nuclear structure |
V | 22 | 1.1 | Defense mechanisms |
T | 73 | 3.6 | Signal transduction mechanisms |
M | 84 | 4.1 | Cell wall/membrane biogenesis |
N | 31 | 1.5 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
O | 70 | 3.4 | Posttranslational modification, protein turnover, chaperones |
C | 149 | 7.3 | Energy production and conversion |
G | 87 | 4.3 | Carbohydrate transport and metabolism |
E | 172 | 8.4 | Amino acid transport and metabolism |
F | 54 | 2.6 | Nucleotide transport and metabolism |
H | 110 | 5.4 | Coenzyme transport and metabolism |
I | 86 | 4.2 | Lipid transport and metabolism |
P | 60 | 2.9 | Inorganic ion transport and metabolism |
Q | 34 | 1.7 | Secondary metabolites biosynthesis, transport and catabolism |
R | 151 | 7.4 | General function prediction only |
S | 98 | 4.8 | Function unknown |
- | 512 | 25.1 | Not in COGs |