Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Arthrobacter phenanthrenivorans type strain (Sphe3)
Code | value | %age | Description |
|---|---|---|---|
J | 153 | 4.5 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.0 | RNA processing and modification |
K | 308 | 9.0 | Transcription |
L | 239 | 7.0 | Replication, recombination and repair |
B | 1 | 0.0 | Chromatin structure and dynamics |
D | 29 | 0.8 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 45 | 1.3 | Defense mechanisms |
T | 135 | 3.9 | Signal transduction mechanisms |
M | 142 | 4.1 | Cell wall/membrane/envelope biogenesis |
N | 2 | 0.0 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 45 | 1.3 | Intracellular trafficking and secretion, and vesicular transport |
O | 100 | 2.9 | Posttranslational modification, protein turnover, chaperones |
C | 205 | 6.0 | Energy production and conversion |
G | 396 | 11.6 | Carbohydrate transport and metabolism |
E | 329 | 9.6 | Amino acid transport and metabolism |
F | 87 | 2.5 | Nucleotide transport and metabolism |
H | 141 | 4.2 | Coenzyme transport and metabolism |
I | 134 | 3.9 | Lipid transport and metabolism |
P | 167 | 4.9 | Inorganic ion transport and metabolism |
Q | 95 | 2.8 | Secondary metabolites biosynthesis, transport and catabolism |
R | 430 | 12.6 | General function prediction only |
S | 238 | 6. 9 | Function unknown |
- | 1,213 | 28.3 | Not in COGs |