Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Methanoplanus petrolearius type strain (SEBR 4847T)
Code | value | %age | Description |
|---|---|---|---|
J | 150 | 7.1 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 106 | 5.0 | Transcription |
L | 80 | 3.8 | Replication, recombination and repair |
B | 2 | 0.1 | Chromatin structure and dynamics |
D | 18 | 0.9 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 28 | 1.3 | Defense mechanisms |
T | 136 | 6.5 | Signal transduction mechanisms |
M | 67 | 3.2 | Cell wall/membrane/envelope biogenesis |
N | 54 | 2.6 | Cell motility |
Z | 1 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 32 | 1.5 | Intracellular trafficking and secretion, and vesicular transport |
O | 80 | 3.8 | Posttranslational modification, protein turnover, chaperones |
C | 185 | 8.8 | Energy production and conversion |
G | 70 | 3.3 | Carbohydrate transport and metabolism |
E | 155 | 7.4 | Amino acid transport and metabolism |
F | 61 | 2.9 | Nucleotide transport and metabolism |
H | 162 | 7.7 | Coenzyme transport and metabolism |
I | 22 | 1.1 | Lipid transport and metabolism |
P | 143 | 6.8 | Inorganic ion transport and metabolism |
Q | 7 | 0.3 | Secondary metabolites biosynthesis, transport and catabolism |
R | 278 | 13.2 | General function prediction only |
S | 267 | 12.7 | Function unknown |
- | 942 | 32.7 | Not in COGs |