Table 4. Number of genes associated with the general COG functional categories
From: Permanent draft genome sequence of Dethiosulfovibrio peptidovorans type strain (SEBR 4207T)
Code | value | %age | Description |
|---|---|---|---|
J | 149 | 6.7 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 129 | 5.9 | Transcription |
L | 115 | 5.3 | Replication, recombination and repair |
B | 0 | 0.0 | Chromatin structure and dynamics |
D | 28 | 1.3 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.0 | Nuclear structure |
V | 32 | 1.5 | Defense mechanisms |
T | 133 | 6.1 | Signal transduction mechanisms |
M | 119 | 5.5 | Cell wall/membrane biogenesis |
N | 75 | 3.5 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 46 | 2.1 | Intracellular trafficking and secretion, and vesicular transport |
O | 70 | 3.2 | Posttranslational modification, protein turnover, chaperones |
C | 142 | 6.5 | Energy production and conversion |
G | 113 | 5.2 | Carbohydrate transport and metabolism |
E | 252 | 11.6 | Amino acid transport and metabolism |
F | 65 | 3.0 | Nucleotide transport and metabolism |
H | 99 | 4.6 | Coenzyme transport and metabolism |
I | 44 | 2.0 | Lipid transport and metabolism |
P | 125 | 5.8 | Inorganic ion transport and metabolism |
Q | 31 | 1.4 | Secondary metabolites biosynthesis, transport and catabolism |
R | 243 | 11.2 | General function prediction only |
S | 161 | 7.4 | Function unknown |
- | 565 | 22.5 | Not in COGs |