Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Acetohalobium arabaticum type strain (Z-7288T)
Code | value | %age | Description |
|---|---|---|---|
J | 133 | 6.5 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 119 | 5.8 | Transcription |
L | 139 | 6.8 | Replication, recombination and repair |
B | 2 | 0.1 | Chromatin structure and dynamics |
D | 26 | 1.3 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 21 | 1.0 | Defense mechanisms |
T | 88 | 4.3 | Signal transduction mechanisms |
M | 123 | 6.0 | Cell wall/membrane/envelope biogenesis |
N | 66 | 3.2 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 56 | 2.8 | Intracellular trafficking, secretion, and vesicular transport |
O | 85 | 4.2 | Posttranslational modification, protein turnover, chaperones |
C | 150 | 7.4 | Energy production and conversion |
G | 62 | 3.0 | Carbohydrate transport and metabolism |
E | 187 | 9.2 | Amino acid transport and metabolism |
F | 61 | 30 | Nucleotide transport and metabolism |
H | 144 | 7.1 | Coenzyme transport and metabolism |
I | 43 | 2.1 | Lipid transport and metabolism |
P | 106 | 5.2 | Inorganic ion transport and metabolism |
Q | 19 | 0.9 | Secondary metabolites biosynthesis, transport and catabolism |
R | 224 | 11.0 | General function prediction only |
S | 183 | 9.0 | Function unknown |
- | 582 | 24.1 | Not in COGs |