Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Meiothermus silvanus type strain (VI-R2T)
Code | value | %age | Description |
|---|---|---|---|
J | 151 | 5.4 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 166 | 6.0 | Transcription |
L | 195 | 7.0 | Replication, recombination and repair |
B | 2 | 0.1 | Chromatin structure and dynamics |
D | 33 | 1.2 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 43 | 1.6 | Defense mechanisms |
T | 120 | 4.3 | Signal transduction mechanisms |
M | 128 | 4.6 | Cell wall/membrane/envelope biogenesis |
N | 26 | 0.9 | Cell motility |
Z | 0 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 53 | 1.9 | Intracellular trafficking, secretion, and vesicular transport |
O | 107 | 5.5 | Posttranslational modification, protein turnover, chaperones |
C | 168 | 6.1 | Energy production and conversion |
G | 218 | 7.9 | Carbohydrate transport and metabolism |
E | 292 | 10.5 | Amino acid transport and metabolism |
F | 85 | 3.1 | Nucleotide transport and metabolism |
H | 110 | 4.0 | Coenzyme transport and metabolism |
I | 88 | 3.2 | Lipid transport and metabolism |
P | 152 | 5.5 | Inorganic ion transport and metabolism |
Q | 52 | 1.9 | Secondary metabolites biosynthesis, transport and catabolism |
R | 362 | 13.0 | General function prediction only |
S | 227 | 8.2 | Function unknown |
- | 1,192 | 32.0 | Not in COGs |