Table 4. Number of genes associated with the general COG functional categories
From: Complete genome sequence of Meiothermus ruber type strain (21T)
Code | value | %age | Description |
|---|---|---|---|
J | 146 | 5.8 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.0 | RNA processing and modification |
K | 131 | 5.2 | Transcription |
L | 117 | 4.7 | Replication, recombination and repair |
B | 2 | 0.1 | Chromatin structure and dynamics |
D | 30 | 1.2 | Cell cycle control, cell division, chromosome partitioning |
Y | 0 | 0.0 | Nuclear structure |
V | 47 | 1.9 | Defense mechanisms |
T | 103 | 4.1 | Signal transduction mechanisms |
M | 114 | 4.5 | Cell wall/membrane/envelope biogenesis |
N | 21 | 0.8 | Cell motility |
Z | 1 | 0.0 | Cytoskeleton |
W | 0 | 0.0 | Extracellular structures |
U | 45 | 1.8 | Intracellular trafficking and secretion, and vesicular transport |
O | 103 | 4.1 | Posttranslational modification, protein turnover, chaperones |
C | 148 | 5.9 | Energy production and conversion |
G | 190 | 7.6 | Carbohydrate transport and metabolism |
E | 290 | 11.5 | Amino acid transport and metabolism |
F | 81 | 3.2 | Nucleotide transport and metabolism |
H | 102 | 4.1 | Coenzyme transport and metabolism |
I | 95 | 3.8 | Lipid transport and metabolism |
P | 139 | 5.5 | Inorganic ion transport and metabolism |
Q | 61 | 2.4 | Secondary metabolites biosynthesis, transport and catabolism |
R | 342 | 13.6 | General function prediction only |
S | 208 | 8.3 | Function unknown |
- | 819 | 26.4 | Not in COGs |