Table 3. Genome Statistics
From: Complete genome sequence of Acidaminococcus fermentans type strain (VR4T)
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 2,329,769 | 100.00% |
DNA coding region (bp) | 2,096,198 | 89.97% |
DNA G+C content (bp) | 1,301,006 | 55.84% |
Number of replicons | 1 | |
Extrachromosomal elements | 0 | |
Total genes | 2,182 | 100.00% |
RNA genes | 81 | 3.71% |
rRNA operons | 6 | |
Protein-coding genes | 2,101 | 96.29% |
Pseudo genes | 75 | 3.44% |
Genes with function prediction | 1,642 | 75.25% |
Genes in paralog clusters | 283 | 13.11% |
Genes assigned to COGs | 1,661 | 76.12% |
Genes assigned Pfam domains | 1,724 | 79.01% |
Genes with signal peptides | 361 | 16.54% |
Genes with transmembrane helices | 519 | 23.79% |
CRISPR repeats | 2 |