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Table 4 Taxonomy and quality values for MAGs generated with the two workflows

From: Integrative meta-omics in Galaxy and beyond

MetaG (Bin)

Taxonomy

Completeness

Contamination

Strain heterogeneity

Bin1

Hungateiclostridium

87.72

24.24

0.00

Bin2

Coprothermobacter proteolyticus

25.00

0.00

0.00

Bin3

Coprothermobacter proteolyticus

14.61

4.55

100.00

Bin4

Coprothermobacter proteolyticus

23.38

10.96

48.15

Bin5

Acetomicrobium

97.41

14.66

100.00

Bin6

Coprothermobacter proteolyticus

9.25

0.00

0.00

Bin7

Firmicutes

97.90

6.53

0.00

Bin8

Methanothermobacter

100

1.29

0.00

Bin9

Clostridia

98.08

8.44

0.00

Bin10

Thermoclostridium stercorarium

83.92

6.29

0.00

Optimized MetaG

Opt-Bin1

Hungateiclostridium thermocellum

99.33

0.00

0.00

Opt-Bin2

Coprothermobacter proteolyticus

100.00

1.79

0.00

Opt-Bin3

Acetomicrobium

97.46

1.69

100.00

Opt-Bin4

Tepidanaerobacter

98.08

7.69

0.00

Opt-Bin5

Firmicutes

97.90

4.55

0.00

Opt-Bin6

Methanothermobacter

100.00

3.69

29.41

Opt-Bin7

Thermoclostridium stercorarium

98.60

4.06

0.00

  1. Quality values were obtained by CheckM and taxonomic annotation by the program ‘CAT bins’. The data is from the Bioreactor dataset