Skip to main content

Table 3 Quality of MAGs generated in the two workflows

From: Integrative meta-omics in Galaxy and beyond

MAG quality count

Bioreactor

Comp

MetaG

Optimized MetaG

MetaG

Optimized MetaG

Lowa

6

0

172

42

Mediumb

3

1

63

51

Highc

1

6

18

50

Sum

10

7

253

143

  1. The number of MAGs with low, medium, and high quality are counted for the standard and optimized MetaG workflow for both the Bioreactor and the Comp dataset
  2. a< 50% completion, ≥ 10% contamination
  3. b≥ 50% completion, < 10% contamination
  4. c> 90% completion, < 5% contamination
Back to article page

Environmental Microbiome

ISSN: 2524-6372