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Fig. 3 | Environmental Microbiome

Fig. 3

From: Integrative meta-omics in Galaxy and beyond

Fig. 3

Annotated KEGG-maps. In ViMO, when KEGG-pathways are selected (top, filtered to pathways in carbohydrate metabolism), a KEGG-map is downloaded and annotated with abundances of expressed genes for the selected MAG. Here is shown the Glycolysis/Gluconeogenesis pathway of MAG001, a bacterium from the Tissierellia class in the SEM1b community, annotated with metaproteomic abundances ranging from low-abundant (0 LFQ; light yellow) to high-abundant (4e9 LFQ; dark red); blue enzymes are not detected in the metaproteome for this MAG

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