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Table 2 Variation in the root-associated bacterial community of apple saplings linked to treatment and sampling timepoint (TP). Differences in beta diversity are first shown related to the combined variables treatment and timepoint (Grouped) in the L- and T-compartment. Below, treatment effects at the individual timepoints are listed. Effect sizes were assessed by PERMANOVA based on DEICODE distance matrices. Significant results (p < 0.05) are in bold

From: Effects of above ground pathogen infection and fungicide application on the root-associated microbiota of apple saplings

Compartment

Variable

PERMANOVA

df

F.Model

R2

p-value

L

Grouped

6

10.044

0.493

0.001

 

TP 1

Treatment

1

1.681

0.081

0.157

 

TP 2

Treatment

1

1.355

0.070

0.240

 

TP 3

Treatment

2

2.763

0.181

0.016

T

Grouped

6

10.085

0.490

0.001

 

TP 1

Treatment

1

1.485

0.076

0.202

 

TP 2

Treatment

1

1.147

0.071

0.327

 

TP 3

Treatment

2

3.238

0.178

0.010