Fig. 5
From: The microbiome and resistome of apple fruits alter in the post-harvest period
Resistome profiles of reconstructed genomes and plasmids from fresh and stored apples samples. A MAGs with sufficient quality are clustered by ANI, values for percentage identity are included for highly similar MAGs, resolved to highest taxonomic levels. Relative abundance of MAGs within the respective metagenome was calculated and is indicated by percentage value on top of each bar. The left bar of each MAG depicts the relative proportion of drug classes to which resistance is conferred by the respective MAG and drug classes are capitalized and underlined in the legend. The right bar represents the ARGs conferring resistance towards the respective drug class. No antibiotic resistant profile was annotated to MAGs assigned to Myxococcales (reconstructed from BR stored metagenome) and M. testacaeum (BR fresh), as indicated by ‘na’ (not assigned). B Resistance networks of MAGs and plasmids. Edge-connected circles indicate potentially transferred resistance genes according to their presence in plasmids and MAGs of the same apple. Size of circles (plasmids: empty circles, MAGs: filled circles) correlate with their total abundance in the respective metagenomes, as shown in the legend on the lower right. Colors of the four groups are defined by apple samples: light blue: BR stored; light yellow: RG stored; dark blue: BR fresh; dark yellow: RG fresh