Fig. 5
From: The treasure inside barley seeds: microbial diversity and plant beneficial bacteria
Phylogenetic analysis of Enterobacteriaceae-related 16S rRNA gene sequences of isolates, ASVs and NCBI reference strains. For the phylogenetic tree, all Enterobacteriaceae-related consensus sequences of isolated endophytes (nine; pink) and the most abundant unclassified Enterobacteriaceae ASVs (eight; blue) were used. Additionally, reference strains were chosen from NCBI database (green). The phylogenetic tree topology was obtained by UPGMA cluster and based on distance methods. Paenibacillus polymyxa DSM 36Â T was used as the outgroup organism. Below the phylogenetic tree, relative abundances of Enterobacteriaceae-related ASVs are shown, the * highlights the ASV that was closely affiliated to the Kosakonia isolates obtained from HOR7985, BCC436 and BCC768 (see also Table 3)