Table 2 Number of genes associated with general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 190 | 6.09 | Translation, ribosomal structure and biogenesis |
A | n.a. | n.a. | RNA processing and modification |
K | 265 | 8.49 | Transcription |
L | 99 | 3.17 | Replication, recombination and repair |
B | 2 | 0.06 | Chromatin structure and dynamics |
D | 29 | 0.93 | Cell cycle control, Cell division, chromosome partitioning |
V | 48 | 1.54 | Defense mechanisms |
T | 119 | 3.81 | Signal transduction mechanisms |
M | 164 | 5.25 | Cell wall/membrane biogenesis |
N | 55 | 1.76 | Cell motility |
U | 74 | 2.37 | Intracellular trafficking and secretion |
O | 140 | 4.48 | Posttranslational modification, protein turnover, chaperones |
C | 190 | 6.09 | Energy production and conversion |
G | 233 | 7.46 | Carbohydrate transport and metabolism |
E | 375 | 12.01 | Amino acid transport and metabolism |
F | 82 | 2.63 | Nucleotide transport and metabolism |
H | 167 | 5.35 | Coenzyme transport and metabolism |
I | 127 | 4.07 | Lipid transport and metabolism |
P | 184 | 5.89 | Inorganic ion transport and metabolism |
Q | 88 | 2.82 | Secondary metabolites biosynthesis, transport and catabolism |
R | 282 | 9.03 | General function prediction only |
S | 176 | 5.64 | Function unknown |
- | 1232 | 30.52 | Not in COGs |