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Table 4 Number of genes associated with general COG functional categories

From: One complete and three draft genome sequences of four Brochothrix thermosphacta strains, CD 337, TAP 175, BSAS1 3 and EBP 3070

Code CD 337 TAP 175 BSAS1 3 EBP 3070 Description
Value %age Value %age Value %age Value %age
J 158 6.09 161 6.40 159 5.96 164 6.28 Translation, ribosomal structure and biogenesis
A ND ND ND ND RNA processing and modification
K 237 9.14 235 9.34 242 9.07 234 8.96 Transcription
L 131 5.05 125 4.97 139 5.21 130 4.98 Replication, recombination and repair
B ND ND ND ND Chromatin structure and dynamics
D 35 1.35 35 1.39 36 1.35 34 1.30 Cell cycle control, Cell division, chromosome partitioning
V 63 2.43 55 2.19 52 1.95 57 2.18 Defense mechanisms
T 100 3.86 95 3.74 98 3.67 99 3.79 Signal transduction mechanisms
M 117 4.51 106 4.21 119 4.46 109 4.17 Cell wall/membrane biogenesis
N 16 0.62 12 0.48 17 0.64 15 0.57 Cell motility
U 33 1.27 27 1.07 29 1.09 28 1.07 Intracellular trafficking and secretion
O 71 2.74 69 2.74 66 2.47 69 2.64 Posttranslational modification, protein turnover, chaperones
C 106 4.09 106 4.21 107 4.01 105 4.02 Energy production and conversion
G 233 8.98 232 9.22 227 5.81 221 8.46 Carbohydrate transport and metabolism
E 244 9.41 247 9.82 246 9.22 242 9.27 Amino acid transport and metabolism
F 72 2.78 71 2.82 71 2.66 71 2.72 Nucleotide transport and metabolism
H 76 2.93 76 3.02 75 2.81 80 3.06 Coenzyme transport and metabolism
I 60 2.31 62 2.46 60 2.25 58 2.22 Lipid transport and metabolism
P 159 6.13 159 6.32 158 5.92 156 5.97 Inorganic ion transport and metabolism
Q 40 1.54 39 1.55 38 1.42 37 1.42 Secondary metabolites biosynthesis, transport and catabolism
R 320 12.34 310 12.33 318 11.92 307 11.76 General function prediction only
S 211 8.14 206 8.19 215 8.06 215 8.23 Function unknown
107 4.14 86 3.49 196 10.05 179 6.89 Not in COGs
  1. The total is based on the total number of protein coding genes in the genome