Skip to main content

Advertisement

Table 5 Comparative analysis of the genome features of B. amyloliquefaciens subsp. plantarum strain Fito_F321 with both B. amyloliquefaciens and B. velezensis. Details for each genome was completed according to the information available at NCBI and EzBioCloud

From: Draft genome sequence of Bacillus amyloliquefaciens subsp. plantarum strain Fito_F321, an endophyte microorganism from Vitis vinifera with biocontrol potential

  Strain GB acession number Isolation source Country Genome size (Mb) G+C content (%) Protein-coding sequences tRNA coding genes rRNA
B. amyloliquefaciens subsp. plantarum strain Fito_F321 MSYT00000000 Leaves (vineyard) Portugal 3.86 46.54% 3.697 86 5
Type-strains B. amyloliquefaciens subsp. plantarum FZB42 CP000560 Soil (sugar beet) Germany 3.92 46.50% 3.687 89 31
B. amyloliquefaciens subsp. amyloliquefaciens DSM 7 FN597644 Not available/unknown Germany 3.98 46.10% 3.870 94 30
Bacillus velezensis KCTC 13012 LHCC00000000.1 River velez Spain 4.04 46.30% 3.806 80 9
Bacillus velezensis NRRL B-41580 LLZC00000000.1 River Velez Spain 4.03 46.30% 3.790 80 9
Non type-strains B. amyloliquefaciens subsp. plantarum SQR9 CP006890 Cucumber rhizosphere China 4.12 46.10% 3.902 72 21
Bacillus amyloliquefaciens WS-8 CP018200.1 Soil China 3.93 46.50% 3.670 86 27
Bacillus amyloliquefaciens CC178 CP006845.1 Cucumber phyllosphere South Korea 3.92 46.50% 3.702 86 27
Bacillus amyloliquefaciens KHG19 CP007242.1 Fermented soybean paste South Korea 3.95 46.60% 3.698 89 31
Bacillus amyloliquefaciens Y2 CP003332.1 Wheat rhizosphere China 4.24 45.90% 4.038 87 31
B. amyloliquefaciens subsp. plantarum AS43.3 CP003838 Surface of a wheat spike USA 3.96 46.60% 3.669 89 31
Bacillus amyloliquefaciens UMAF6614 CP006960.1 Not available/unknown Not available/unknown 4.01 46.50% 3.754 83 27
Bacillus amyloliquefaciens B15 CP014783.1 Grape skin China 4.01 46.50% 3.759 90 31
Bacillus amyloliquefaciens UMAF6639 CP006058.1 Not available/unknown Not available/unknown 4.03 46.30% 3.741 83 27
Bacillus amyloliquefaciens S499 CP014700.1 Soil Democratic Republic of the Congo 3.93 46.60% 3.720 81 24
Bacillus amyloliquefaciens IT-45 CP004065.1 Not available/unknown Not available/unknown 3.93 46.60% 3.726 95 30
Bacillus amyloliquefaciens LFB112 CP006952.1 Chinese herbs China 3.94 46.70% 3.684 94 32
Bacillus amyloliquefaciens Y14 CP017953.1 Rhizosphere of peanut China 3.96 46.40% 3.741 87 27
Bacillus amyloliquefaciens LM2303 CP018152.1 Wild yak dung China 3.99 46.70% 3.771 86 27
Bacillus amyloliquefaciens L-S60 CP011278.1 Soil China 3.90 46.70% 3.662 91 28
Bacillus amyloliquefaciens L-H15 CP010556.1 Cucumber seedlings China 3.91 46.70% 3.666 84 28
Bacillus amyloliquefaciens MBE1283 CP013727.1 Korean traditional alcoholic beverage South Korea 3.97 46.50% 3.725 86 27
Bacillus amyloliquefaciens RD7-7 CP016913.1 Fermented soybean paste South Korea 3.69 46.30% 3.501 87 27
Bacillus amyloliquefaciens MT45 CP011252.1 Daqu China 3.90 46.10% 3.752 81 24
Bacillus amyloliquefaciens SRCM101267 CP021505.1 Food South Korea 4.07 45.90% 4.014 87 27
Bacillus amyloliquefaciens LL3 CP002634.1 Fermented food South Korea 4.00 45.69% 3.935 72 22
Bacillus amyloliquefaciens TA208 CP002627.1 Soil China 3.94 45.80% 3.891 70 19
Bacillus amyloliquefaciens XH7 CP002927.1 Not available/unknown Not available/unknown 3.94 45.80% 3.889 75 22