Skip to main content

Advertisement

Table 5 Number of genes associated with general COG functional categories

From: Complete genome sequence of the nitrogen-fixing bacterium Azospirillum humicireducens type strain SgZ-5T

Code Value % of totala Description
J 182 2.98 Translation, ribosomal structure and biogenesis
A 0 0.00 RNA processing and modification
K 357 5.85 Transcription
L 175 2.87 Replication, recombination and repair
B 1 0.02 Chromatin structure and dynamics
D 38 0.62 Cell cycle control, cell division, chromosome partitioning
V 80 1.31 Defense mechanisms
T 338 5.54 Signal transduction mechanisms
M 218 3.57 Cell wall/membrane/envelope biogenesis
N 73 1.20 Cell motility
U 58 0.95 Intracellular trafficking, secretion, and vesicular transport
O 162 2.65 Posttranslational modification, protein turnover, chaperones
C 342 5.60 Energy production and conversion
G 263 4.31 Carbohydrate transport and metabolism
E 448 7.34 Amino acid transport and metabolism
F 81 1.33 Nucleotide transport and metabolism
H 160 2.62 Coenzyme transport and metabolism
I 139 2.28 Lipid transport and metabolism
P 333 5.45 Inorganic ion transport and metabolism
Q 144 2.36 Secondary metabolites biosynthesis, transport and catabolism
R 227 3.72 General function prediction only
S 731 11.97 Function unknown
1555 25.47 Not in COGs
  1. aThe total is based on the total number of protein coding genes in the annotated genome