Table 5 Number of genes associated with general COG functional categories
Code | Value | % of totala | Description |
|---|---|---|---|
J | 182 | 2.98 | Translation, ribosomal structure and biogenesis |
A | 0 | 0.00 | RNA processing and modification |
K | 357 | 5.85 | Transcription |
L | 175 | 2.87 | Replication, recombination and repair |
B | 1 | 0.02 | Chromatin structure and dynamics |
D | 38 | 0.62 | Cell cycle control, cell division, chromosome partitioning |
V | 80 | 1.31 | Defense mechanisms |
T | 338 | 5.54 | Signal transduction mechanisms |
M | 218 | 3.57 | Cell wall/membrane/envelope biogenesis |
N | 73 | 1.20 | Cell motility |
U | 58 | 0.95 | Intracellular trafficking, secretion, and vesicular transport |
O | 162 | 2.65 | Posttranslational modification, protein turnover, chaperones |
C | 342 | 5.60 | Energy production and conversion |
G | 263 | 4.31 | Carbohydrate transport and metabolism |
E | 448 | 7.34 | Amino acid transport and metabolism |
F | 81 | 1.33 | Nucleotide transport and metabolism |
H | 160 | 2.62 | Coenzyme transport and metabolism |
I | 139 | 2.28 | Lipid transport and metabolism |
P | 333 | 5.45 | Inorganic ion transport and metabolism |
Q | 144 | 2.36 | Secondary metabolites biosynthesis, transport and catabolism |
R | 227 | 3.72 | General function prediction only |
S | 731 | 11.97 | Function unknown |
– | 1555 | 25.47 | Not in COGs |