Table 4 Genome statistics
From: Short genome report of cellulose-producing commensal Escherichia coli 1094
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 5,176,780 | 100.0 |
DNA coding (bp) | 4,503,495 | 86.9 |
DNA G + C (bp) | 2,340,599 | 50.9 |
DNA scaffolds | 4 | 100.0 |
Total genes | 5138 | 100.0 |
Protein coding genes | 5028 | 97.8 |
RNA genes | 110 | 2.1 |
Pseudo genes | 0 | 0 |
Genes in internal clusters | 232 | 4.5 |
Genes with function prediction | 4390 | 85.4 |
Genes assigned to COGs | 4827 | 93.9 |
Genes with Pfam domains | 4377 | 85.2 |
Genes with signal peptides | 398 | 7.7 |
Genes with transmembrane helices | 1099 | 21.4 |
CRISPR repeats | 11 | 0.2 |