Table 4 Number of genes associated with general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 189 | 3.96 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.02 | RNA processing and modification |
K | 368 | 7.71 | Transcription |
L | 216 | 4.53 | Replication, recombination and repair |
B | 2 | 0.04 | Chromatin structure and dynamics |
D | 43 | 0.90 | Cell cycle control, Cell division, chromosome partitioning |
V | 59 | 1.24 | Defense mechanisms |
T | 425 | 8.90 | Signal transduction mechanisms |
M | 232 | 4.86 | Cell wall/membrane biogenesis |
N | 133 | 2.79 | Cell motility |
U | 107 | 2.24 | Intracellular trafficking and secretion |
O | 176 | 3.69 | Posttranslational modification, protein turnover, chaperones |
C | 285 | 5.97 | Energy production and conversion |
G | 196 | 4.11 | Carbohydrate transport and metabolism |
E | 433 | 9.07 | Amino acid transport and metabolism |
F | 88 | 1.84 | Nucleotide transport and metabolism |
H | 179 | 3.75 | Coenzyme transport and metabolism |
I | 189 | 3.96 | Lipid transport and metabolism |
P | 256 | 5.36 | Inorganic ion transport and metabolism |
Q | 118 | 2.47 | Secondary metabolites biosynthesis, transport and catabolism |
R | 574 | 12.03 | General function prediction only |
S | 423 | 8.86 | Function unknown |
– | 846 | 17.72 | Not in COGs |