Table 3 Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 3,902,380 | 100 |
DNA coding (bp) | 3,237,729 | 82.97 |
DNA G + C (bp) | 1,966,019 | 50.38 |
DNA scaffolds | 127 | – |
Total genes | 3733 | 100 |
Protein coding genes | 3683 | 98.66 |
RNA genes | 50 | 1.34 |
Pseudo genes | NA | NA |
Genes in internal clusters | NA | NA |
Genes with function prediction | 2588 | 69.33 |
Genes assigned to COGs | 2893 | 77.50 |
Genes with Pfam domains | 3111 | 83.34 |
Genes with signal peptides | 434 | 11.63 |
Genes with transmembrane helices | 799 | 21.40 |
CRISPR repeats | 2 | – |