Table 5 Number of genes of Ensifer meliloti FSM-MA associated with general COG functional categories

J

164

4.59

7

0.47

16

1.00

187

2.81

Translation, ribosomal structure and biogenesis

A

0

0.00

0

0.00

0

0.00

0

0.00

RNA processing and modification

K

246

6.88

132

8.91

138

8.65

516

7.76

Transcription

L

140

3.92

40

2.70

26

1.63

206

3.10

Replication, recombination and repair

B

1

0.03

0

0.00

0

0.00

1

0.02

Chromatin structure and dynamics

D

30

0.84

5

0.34

10

0.63

45

0.68

Cell cycle control, cell division, chromosome partitioning

V

34

0.95

11

0.74

20

1.25

65

0.98

Defense mechanisms

T

135

3.78

77

5.20

71

4.45

283

4.26

Signal transduction mechanisms

M

148

4.14

32

2.16

104

6.52

284

4.27

Cell wall/membrane/envelope biogenesis

N

55

1.54

12

0.81

6

0.38

73

1.10

Cell motility

U

70

1.96

33

2.23

3

0.19

106

1.59

Intracellular trafficking, secretion, and vesicular transport

O

127

3.55

31

2.09

22

1.38

180

2.71

Posttranslational modification, protein turnover, chaperones

C

177

4.95

121

8.17

75

4.70

373

5.61

Energy production and conversion

G

236

6.60

94

6.35

245

15.36

575

8.65

Carbohydrate transport and metabolism

E

353

9.88

137

9.25

139

8.71

629

9.46

Amino acid transport and metabolism

F

82

2.29

7

0.47

21

1.32

110

1.65

Nucleotide transport and metabolism

H

133

3.72

31

2.09

35

2.19

199

2.99

Coenzyme transport and metabolism

I

117

3.27

37

2.50

53

3.32

207

3.11

Lipid transport and metabolism

P

140

3.92

81

5.47

78

4.89

299

4.50

Inorganic ion transport and metabolism

Q

76

2.13

35

2.36

42

2.63

153

2.30

Secondary metabolites biosynthesis, transport and catabolism

R

399

11.16

172

11.61

169

10.60

740

11.13

General function prediction only

S

361

10.10

87

5.87

121

7.59

569

8.56

Function unknown

W

1

0.03

0

0.00

0

0.00

1

0.02

Extracellular structures

–

349

9.76

299

20.19

201

12.60

849

12.77

Not in COGs