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Table 6 Number of genes associated with general COG functional categories of Paraburkholderia terrae strain BS110, BS007, and BS437

From: Draft genome sequences of three fungal-interactive Paraburkholderia terrae strains, BS007, BS110 and BS437

Code Strain BS110 Strain BS007 Strain BS437 Description
Value % of totala Value % of totala Value % of totala
J 242 2.03 242 2.03 253 2.06 Translation, ribosomal structure and biogenesis
A 1 0.008 1 0.008 1 0.008 RNA processing and modification
K 1030 8.65 1030 8.65 1026 8.37 Transcription
L 422 3.54 422 3.54 443 3.61 Replication, recombination and repair
B 4 0.03 4 0.03 4 0.03 Chromatin structure and dynamics
D 68 0.57 68 0.57 69 0.56 Cell cycle control, cell division, chromosome partitioning
V 95 0.79 95 0.79 104 0.84 Defense mechanisms
T 573 4.81 573 4.8 605 4.93 Signal transduction mechanisms
M 547 4.59 547 4.59 553 4.51 Cell wall/membrane biogenesis
N 161 1.35 161 1.35 172 1.4 Cell motility
U 202 1.69 202 1.69 210 1.71 Intracellular trafficking and secretion
O 267 2.24 267 2.24 271 2.21 Posttranslational modification, protein turnover, chaperones
C 774 6.5 774 6.5 793 6.47 Energy production and conversion
G 784 6.58 784 6.58 769 6.27 Carbohydrate transport and metabolism
E 1193 10.02 1193 10.02 1188 9.69 Amino acid transport and metabolism
F 114 0.96 114 0.96 109 0.89 Nucleotide transport and metabolism
H 263 2.21 263 2.21 268 2.18 Coenzyme transport and metabolism
I 461 3.87 461 3.87 476 3.88 Lipid transport and metabolism
P 706 5.93 706 5.93 713 5.81 Inorganic ion transport and metabolism
Q 387 3.25 387 3.25 395 3.22 Secondary metabolite biosynthesis, transport and catabolism
R 1496 12.57 1496 12.57 1544 12.59 General function prediction only
S 682 5.73 682 5.73 703 5.73 Function unknown
W 15 0.13 15 0.13 15 0.12 Extracellular structure
Z 1 0.008 1 0.008 1 0.008 Cytoskeleton
  1. aThe total is based on the total number of protein encoding genes in the genome