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Table 4 Number of genes associated with general COG functional categories

From: Draft genome sequence of the type strain of the sulfur-oxidizing acidophile, Acidithiobacillus albertensis (DSM 14366)

Code Value %age Description
J 135 4.22 Translation
A 1 0.03 RNA processing and modification
K 124 3.87 Transcription
L 181 5.65 Replication, recombination and repair
B 1 0.03 Chromatin structure and dynamics
D 29 0.91 Cell cycle control, mitosis and meiosis
Y 0 0.00 Nuclear structure
V 52 1.62 Defense mechanisms
T 127 3.97 Signal transduction mechanisms
M 203 6.34 Cell wall/membrane biogenesis
N 66 2.06 Cell motility
Z 0 0.00 Cytoskeleton
W 0 0.00 Extracellular structures
U 102 3.19 Intracellular trafficking and secretion
O 104 3.25 Posttranslational modification, protein turnover, chaperones
C 169 5.28 Energy production and conversion
G 113 3.53 Carbohydrate transport and metabolism
E 156 4.87 Amino acid transport and metabolism
F 53 1.66 Nucleotide transport and metabolism
H 102 3.19 Coenzyme transport and metabolism
I 57 1.78 Lipid transport and metabolism
P 109 3.40 Inorganic ion transport and metabolism
Q 37 1.16 Secondary metabolites biosynthesis, transport and catabolism
R 222 6.93 General function prediction only
S 179 5.60 Function unknown
880 27,48 Not in COGs
  1. The total is based on the total number of predicted protein coding genes in the annotated genome