Table 4 Number of genes associated with general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 135 | 4.22 | Translation |
A | 1 | 0.03 | RNA processing and modification |
K | 124 | 3.87 | Transcription |
L | 181 | 5.65 | Replication, recombination and repair |
B | 1 | 0.03 | Chromatin structure and dynamics |
D | 29 | 0.91 | Cell cycle control, mitosis and meiosis |
Y | 0 | 0.00 | Nuclear structure |
V | 52 | 1.62 | Defense mechanisms |
T | 127 | 3.97 | Signal transduction mechanisms |
M | 203 | 6.34 | Cell wall/membrane biogenesis |
N | 66 | 2.06 | Cell motility |
Z | 0 | 0.00 | Cytoskeleton |
W | 0 | 0.00 | Extracellular structures |
U | 102 | 3.19 | Intracellular trafficking and secretion |
O | 104 | 3.25 | Posttranslational modification, protein turnover, chaperones |
C | 169 | 5.28 | Energy production and conversion |
G | 113 | 3.53 | Carbohydrate transport and metabolism |
E | 156 | 4.87 | Amino acid transport and metabolism |
F | 53 | 1.66 | Nucleotide transport and metabolism |
H | 102 | 3.19 | Coenzyme transport and metabolism |
I | 57 | 1.78 | Lipid transport and metabolism |
P | 109 | 3.40 | Inorganic ion transport and metabolism |
Q | 37 | 1.16 | Secondary metabolites biosynthesis, transport and catabolism |
R | 222 | 6.93 | General function prediction only |
S | 179 | 5.60 | Function unknown |
– | 880 | 27,48 | Not in COGs |