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Table 3 Genome statistics

From: Draft genome sequence of the type strain of the sulfur-oxidizing acidophile, Acidithiobacillus albertensis (DSM 14366)

Attribute

Value

% of Totala

Genome size (bp)

3,497,418

100.00

DNA coding (bp)

2,930,787

83.80

DNA G + C (bp)

1,836,144

52.50

DNA scaffolds

141

100.00

Total genesb

3202

100.00

Protein coding genes

3149

98.34

RNA genesc

53

1.66

Pseudo genes

n.d

n.d

Genes in internal clusters

n.d

n.d

Genes with function prediction

1967

61.43

Genes assigned to COGs

2322

72.52

Genes with Pfam domains

2152

67,21

Genes with signalpeptides

374

11.68

Genes with transmembrane helices

727

22.70

CRISPR repeats

0

0

  1. aThe total is based on either the size of the genome in base pairs or the total number of genes in theannotated genome
  2. bIncludes tRNA, tmRNA, rRNA
  3. cIncludes 23S, 16S and 5S rRNA