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Table 3 Genome statistics

From: Draft genome sequence of the type strain of the sulfur-oxidizing acidophile, Acidithiobacillus albertensis (DSM 14366)

Attribute Value % of Totala
Genome size (bp) 3,497,418 100.00
DNA coding (bp) 2,930,787 83.80
DNA G + C (bp) 1,836,144 52.50
DNA scaffolds 141 100.00
Total genesb 3202 100.00
Protein coding genes 3149 98.34
RNA genesc 53 1.66
Pseudo genes n.d n.d
Genes in internal clusters n.d n.d
Genes with function prediction 1967 61.43
Genes assigned to COGs 2322 72.52
Genes with Pfam domains 2152 67,21
Genes with signalpeptides 374 11.68
Genes with transmembrane helices 727 22.70
CRISPR repeats 0 0
  1. aThe total is based on either the size of the genome in base pairs or the total number of genes in theannotated genome
  2. bIncludes tRNA, tmRNA, rRNA
  3. cIncludes 23S, 16S and 5S rRNA