Table 4 Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 4,985,901 | 100.0 |
DNA coding (bp) | 4,267,050 | 85.6 |
DNA GÂ +Â C (bp) | 2,543,529 | 51.0 |
DNA scaffolds | 1 | 100.0 |
Total genes | 4498 | 100.0 |
Protein coding genes | 4233 | 94.1 |
RNA genes | 118 | 2.6 |
Pseudo genes | 121 | 2.7 |
Genes in internal clusters | 792 | 17.6 |
Genes with function prediction | 4380 | 97.4 |
Genes assigned to COGs | 3378 | 75.1 |
Genes with Pfam domains | 2661 | 59.2 |
Genes with signal peptides | 295 | 6.6 |
Genes with transmembrane helices | 1197 | 26.6 |
CRIPSR repeats | 4 | – |