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Table 3 Genome statistics

From: Draft genome sequence of Marinobacterium rhizophilum CL-YJ9T (DSM 18822T), isolated from the rhizosphere of the coastal tidal-flat plant Suaeda japonica

Attribute

Number

% of totala

Genome size (bp)

5,364,574

100

DNA coding (bp)

4,619,007

86.10

DNA G + C (bp)

3,136,815

58.47

DNA scaffolds

58

100

Total genes

4853

100

Protein coding genes

4762

98.12

RNA genes

91

1.88

Pseudo genes

0

 

Genes in internal clusters

642

13.23

Genes with functional prediction

3878

79.91

Genes assigned to COGs

3433

70.74

Genes with Pfam domains

4066

83.78

Genes with signal peptides

386

7.95

Genes with transmembrane helices

1137

23.43

CRISPR repeats

1

 
  1. aThe total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome