Table 5 Number of genes associated with general COG functional categories
Code | Value | %age | Description |
|---|---|---|---|
J | 182 | 3.50 | Translation, ribosomal structure and biogenesis |
A | 3 | 0.06 | RNA processing and modification |
K | 342 | 6.57 | Transcription |
L | 204 | 3.92 | Replication, recombination and repair |
B | 3 | 0.06 | Chromatin structure and dynamics |
D | 52 | 1.00 | Cell cycle control, Cell division, chromosome partitioning |
V | 69 | 1.33 | Defense mechanisms |
T | 564 | 10.84 | Signal transduction mechanisms |
M | 252 | 4.84 | Cell wall/membrane biogenesis |
N | 177 | 3.40 | Cell motility |
U | 142 | 2.73 | Intracellular trafficking and secretion |
O | 189 | 3.63 | Posttranslational modification, protein turnover, chaperones |
C | 362 | 6.96 | Energy production and conversion |
G | 130 | 2.50 | Carbohydrate transport and metabolism |
E | 305 | 5.86 | Amino acid transport and metabolism |
F | 85 | 1.63 | Nucleotide transport and metabolism |
H | 185 | 3.56 | Coenzyme transport and metabolism |
I | 202 | 3.88 | Lipid transport and metabolism |
P | 283 | 5.44 | Inorganic ion transport and metabolism |
Q | 126 | 2.42 | Secondary metabolites biosynthesis, transport and catabolism |
R | 520 | 10.00 | General function prediction only |
S | 351 | 6.75 | Function unknown |
– | 1011 | 19.43 | Not in COGs |