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Fig. 2 | Standards in Genomic Sciences

Fig. 2

From: Draft genome sequence and characterization of commensal Escherichia coli strain BG1 isolated from bovine gastro-intestinal tract

Fig. 2

Phylogenetic tree highlighting the position of E. coli BG1 relative to other E. coli strains. The whole genome SNP based phylogeny was established with CSI phylogeny 1.4 [28] using the genome of K71 as a reference and standard input parameters. The tree was midpoint rooted and plotted using Seaview (version 4.6.1) [56]. Each strain is identified as H (Human), B (Bovine), A (Avian), F (Food) or K12 (Laboratory strain), and its clinical or non-pathogenic (NP) characteristic is specified.

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Environmental Microbiome

ISSN: 2524-6372