Table 4 Number of genes associated with general COG functional categories
Code | Value | % age | Description |
|---|---|---|---|
J | 180 | 6.69 | Translation, ribosomal structure and biogenesis |
A | 1 | 0.04 | RNA processing and modification |
K | 228 | 8.48 | Transcription |
L | 112 | 4.17 | Replication, recombination and repair |
B | 1 | 0.04 | Chromatin structure and dynamics |
D | 25 | 0.93 | Cell cycle control, Cell division, chromosome partitioning |
V | 53 | 1.97 | Defense mechanisms |
T | 113 | 4.2 | Signal transduction mechanisms |
M | 106 | 3.94 | Cell wall/membrane biogenesis |
N | 28 | 1.04 | Cell motility |
Z | 1 | 0.04 | Cytoskeleton |
W | 3 | 0.11 | Extracellular structures |
U | 25 | 0.93 | Intracellular trafficking and secretion |
O | 104 | 3.87 | Posttranslational modification, protein turnover, chaperones |
C | 183 | 6.81 | Energy production and conversion |
G | 242 | 9 | Carbohydrate transport and metabolism |
E | 281 | 10.45 | Amino acid transport and metabolism |
F | 80 | 2.98 | Nucleotide transport and metabolism |
H | 156 | 5.8 | Coenzyme transport and metabolism |
I | 151 | 5.62 | Lipid transport and metabolism |
P | 174 | 6.47 | Inorganic ion transport and metabolism |
Q | 74 | 2.75 | Secondary metabolites biosynthesis, transport and catabolism |
R | 228 | 8.48 | General function prediction only |
S | 115 | 4.28 | Function unknown |
- | 1497 | 38.46 | Not in COGs |