Table 4 Number of genes associated with general COG functional categories
Code | Value | % of total | Description |
|---|---|---|---|
J | 324 | 2.99 | Translation, ribosomal structure and biogenesis |
A | 29 | 0.20 | RNA processing and modification |
K | 337 | 3.11 | Transcription |
L | 362 | 3.35 | Replication, recombination and repair |
B | 42 | 0.30 | Chromatin structure and dynamics |
D | 80 | 0.70 | Cell cycle control, cell division, chromosome partitioning |
Y | 2 | 0.01 | Nuclear structure |
V | 70 | 0.60 | Defense mechanisms |
T | 236 | 2.18 | Signal transduction mechanisms |
M | 179 | 1.65 | Cell wall/membrane biogenesis |
N | 3 | 0.02 | Cell motility |
Z | 51 | 0.40 | Cytoskeleton |
W | 0 | 0 | Extracellular structures |
U | 90 | 0.80 | Intracellular trafficking and secretion |
O | 311 | 2.87 | Posttranslational modification, protein turnover, chaperones |
C | 437 | 4.04 | Energy production and conversion |
G | 813 | 7.52 | Carbohydrate transport and metabolism |
E | 910 | 8.42 | Amino acid transport and metabolism |
F | 129 | 1.19 | Nucleotide transport and metabolism |
H | 250 | 2.31 | Coenzyme transport and metabolism |
I | 409 | 3.78 | Lipid transport and metabolism |
P | 616 | 5.70 | Inorganic ion transport and metabolism |
Q | 600 | 5.55 | Secondary metabolites biosynthesis, transport and catabolism |
R | 1772 | 16.40 | General function prediction only |
S | 195 | 1.80 | Function unknown |
- | 3295 | 30.49 | Not in COGs |