Table 4 Number of genes associated with general COG functional categories
Code | Value | % age | Description |
|---|---|---|---|
J | 158 | 6.13 | Translation, ribosomal structure and biogenesis |
A | 2 | 0.08 | RNA processing and modification |
K | 129 | 5.00 | Transcription |
L | 110 | 4.27 | Replication, recombination and repair |
B | 4 | 0.16 | Chromatin structure and dynamics |
D | 25 | 0.97 | Cell cycle control, Cell division, chromosome partitioning |
V | 43 | 1.67 | Defense mechanisms |
T | 165 | 6.40 | Signal transduction mechanisms |
M | 167 | 6.48 | Cell wall/membrane biogenesis |
N | 61 | 2.37 | Cell motility |
U | 87 | 3.37 | Intracellular trafficking and secretion |
O | 117 | 4.54 | Posttranslational modification, protein turnover, chaperones |
C | 169 | 6.56 | Energy production and conversion |
G | 97 | 3.76 | Carbohydrate transport and metabolism |
E | 172 | 6.67 | Amino acid transport and metabolism |
F | 63 | 2.44 | Nucleotide transport and metabolism |
H | 123 | 4.77 | Coenzyme transport and metabolism |
I | 152 | 5.90 | Lipid transport and metabolism |
P | 127 | 4.93 | Inorganic ion transport and metabolism |
Q | 79 | 3.06 | Secondary metabolites biosynthesis, transport and catabolism |
R | 286 | 11.09 | General function prediction only |
S | 242 | 9.39 | Function unknown |
- | 546 | 19.01 | Not in COGs |