Table 3 Genome statistics
Attribute | Value | % of Total |
|---|---|---|
Genome size (bp) | 4,663,437 | 100.00 |
DNA coding (bp) | 4,100,739 | 87.93 |
DNA G + C (bp) | 3,015,845 | 64.67 |
DNA scaffolds | 8 | 100.00 |
Total genes | 4309 | 100.00 |
Protein coding genes | 3956 | 91.81 |
RNA genes | 89 | 2.07 |
Pseudo genes | 264 | 6.12 |
Genes in internal clusters | 4250 | 98.63 |
Genes with function prediction | 3527 | 81.85 |
Genes assigned to COGs | 2210 | 51.29 |
Genes with Pfam domains | 3464 | 80.39 |
Genes with signal peptides | 220 | 5.11 |
Genes with transmembrane helices | 249 | 5.78 |
CRISPR repeats | 125 | 2.90 |